Commits · main · Z03-Workshop / Intro to NF Core Pipelines

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Nov 28, 2025
- sorry, Niklas · 9122cf31
  Amit Fenn authored Nov 28, 2025
  
  9122cf31
Nov 27, 2025
- Updated README.md(s) · 576e4887
  Amit Fenn authored Nov 27, 2025
  
  576e4887
- Updated Readme · a221c6a9
  Amit Fenn authored Nov 27, 2025
  
  a221c6a9
- using the new config · 3faa4dc2
  Amit Fenn authored Nov 27, 2025
  
  3faa4dc2
- presentations updated · 5815e390
  Amit Fenn authored Nov 27, 2025
  
  5815e390
Nov 13, 2025
- nfcore config proposal update · da4d9ba5
  Niklas Schandry authored Nov 13, 2025
  
  da4d9ba5
- nfcore config proposal update · 4ee5cbed
  Niklas Schandry authored Nov 13, 2025
  
  4ee5cbed
- Edit README.md update arabidopsis links · 7c1305cf
  Amit Fenn authored Nov 13, 2025
  
  7c1305cf
- nfcore config proposal · f2881b78
  Niklas Schandry authored Nov 13, 2025
  
  f2881b78
Nov 12, 2025
- Edit slurm_withflux_submit.sbatch · dfa43ca5
  Amit Fenn authored Nov 12, 2025
  
  dfa43ca5
- Edit slurm_withflux_submit.sbatch · 455d586d
  Amit Fenn authored Nov 12, 2025
  
  455d586d
- Edit flux_wrapper.sh · d43557a7
  Amit Fenn authored Nov 12, 2025
  
  d43557a7
- Edit slurm_withflux_submit.sbatch · a5de0aa7
  Amit Fenn authored Nov 12, 2025
  
  a5de0aa7
- Edit nf-core.fetchngs.sh · c6a10773
  Amit Fenn authored Nov 12, 2025
  
  c6a10773
- Edit slurm_withflux_submit.sbatch · fe642208
  Amit Fenn authored Nov 12, 2025
  
  fe642208
- Edit slurm_withflux_submit.sbatch · 6fd9ff15
  Amit Fenn authored Nov 12, 2025
  
  6fd9ff15
- update presentations Niklas · a353efde
  Niklas Schandry authored Nov 12, 2025
  
  a353efde
- Edit install_conda_nf.sh Reservations · 640a1603
  Amit Fenn authored Nov 12, 2025
  
  640a1603
- Upload New File · d2367a30
  Namratha Pavuluri authored Nov 12, 2025
  
  d2367a30
- Amit Presentations · 1284a6a8
  Amit Fenn authored Nov 12, 2025
  
  1284a6a8
- Amit Presentations · 531e004d
  Amit Fenn authored Nov 12, 2025
  
  531e004d
Nov 11, 2025
- update presentations · 365a8d6b
  Niklas Schandry authored Nov 11, 2025
  
  365a8d6b
- update presentations · 84550c8e
  Niklas Schandry authored Nov 11, 2025
  
  84550c8e
- Edit install_conda_nf.sh · 4fdb26d5
  Namratha Pavuluri authored Nov 11, 2025
  
  4fdb26d5
- Edit README.md · eb7b27ab
  Amit Fenn authored Nov 11, 2025
  
  eb7b27ab
- installation sh script · 70e66765
  Namratha Pavuluri authored Nov 11, 2025
  
  70e66765
- Introduction files · 22c9f677
  Namratha Pavuluri authored Nov 11, 2025
  
  22c9f677
- edited timeslot 1:30 - 2:45 on Day 2 · e919881d
  Frederik Dröst authored Nov 11, 2025
  
  e919881d
Nov 10, 2025
- Merge branch 'main' of https://gitlab.plantmicrobe.de/z03-workshop/intro-to-nf-core-pipelines · eba80854
  Amit Fenn authored Nov 10, 2025
  
  eba80854
- FetchNGS on conda, RNA-Seq still has gff issues · 4b13e3a7
  Amit Fenn authored Nov 10, 2025
  
  4b13e3a7
Nov 07, 2025
- update presentation03 · 6deee8d0
  Niklas Schandry authored Nov 07, 2025
  
  6deee8d0
- update AGENDA · a57a1598
  Niklas Schandry authored Nov 07, 2025
  
  a57a1598
Nov 06, 2025
- SLURM scripts aimed at reservations · 5c78f5f9
  Amit Fenn authored Nov 06, 2025
  
  5c78f5f9
- Merge branch 'main' of https://gitlab.plantmicrobe.de/z03-workshop/intro-to-nf-core-pipelines · 3d83659c
  Amit Fenn authored Nov 06, 2025
  
  3d83659c
- FetchNGS works, simplified scripts · 54aca6c9
  Amit Fenn authored Nov 06, 2025
  
  54aca6c9
- more presentation · 7a925ab0
  Niklas Schandry authored Nov 06, 2025
  
  7a925ab0
Nov 04, 2025
- simple pipeline · 04d209d8
  Niklas Schandry authored Nov 04, 2025
  
  04d209d8
Nov 03, 2025
- talks 1 and 2 · 3c62be18
  Niklas Schandry authored Nov 03, 2025
  
  3c62be18
- Edit README.md · f8749593
  Niklas Schandry authored Nov 03, 2025
  
  f8749593
Oct 31, 2025
- more slides · 7b4ef224
  Niklas Schandry authored Oct 31, 2025
  
  7b4ef224